Hello Miguel,
There may be an issue with the version of python you are sourcing. The utility requires python 3.6+.
To check your version you can run: 'python --version'
If your version of python is not 3.6+ you will need to source an updated version of python.
Best, Jackson ________________________________ From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Miguel Ángel Rivas Fernández miguelrivasfdez@gmail.com Sent: Monday, September 20, 2021 4:44 AM To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] Freesurfer V6: aparcstats2table command python issues
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Dear Freesurfer experts,
I am trying to use the aparcstats2table command (FSurfer V.6) in order to export the thickness measures but there should be an issue with my python version. This is the complete output:
aparcstats2table --hemi lh --subjects 4166 --meas thickness --parc aparc.a2009s --tablefile thickness.txt
Usage: python [options] python: error: no such option: --hemi
Could you give me some suggestions to solve this problem?
Thank you very much in advance.
Best regards, -- Miguel Ángel Rivas Fernández