Hi Bruce, no, but do you mean by the entire subject directory? Thank you so much, regards, E.
On Fri, Nov 20, 2015 at 1:45 PM, Bruce Fischl fischl@nmr.mgh.harvard.edu wrote:
Hi Elisabetta
we would need the entire subject directory. Did you look at the surfaces I suggested?
cheers Bruce On Fri, 20 Nov 2015, Elisabetta del Re wrote:
Hi Bruce, thank you so much. I attach here T1 of 2 of the cases. Thank you again, regards, Elisabetta
On 11/4/15, Bruce Fischl fischl@nmr.mgh.harvard.edu wrote:
Hi Elisabetta
I don't think that's an error, just a warning. That said, a defect with 38K vertices is awfully big, almost 1/4 of the surface, which usually
means
something big is wrong (e.g. cerebellum or skull attached to the hemi).
Can
you look at the orig.nofix or the inflated.nofix and see what is wrong?
If
you upload one of the subjects I'll take a look
cheers Bruce
On Wed, 4 Nov 2015, Elisabetta del Re wrote:
Dear FreeSurfer team,we are running FreeSurfer on 1.5T cases. For a few of them we get error messages that I am attaching. Mostly the message error relates to excessive topological defect. Any suggestions you can give to us? Thank you, regards, Elisabetta
-- Elisabetta C. del Re, Ph.D. Instructor, Department of Psychiatry Harvard Medical School phone 617 9675569 mail elisabetta_delre@hms.harvard.edu
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