Yes that would be awesome.
I am using the Martinos file drop, hope it is ok.
Thank you,
Vale
________________________________ From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Bruce Fischl fischl@nmr.mgh.harvard.edu Sent: Wednesday, June 19, 2019 4:55:53 PM To: Freesurfer support list Subject: Re: [Freesurfer] problem with reconstruction
Hi Vale
do you want to tar, gzip and ftp us that entire subject dir so we can take a look? cheers Bruce On Wed, 19 Jun 2019, Barletta, Valeria wrote:
Dear Freesurfers,
I am having issues with a reconstruction which is giving me giant defects that I cannot correct (see screenshots).
I tried to work on the wm and also to use the command
recon-all -subject NIMMS02_2year_recon -T2 T2SPACE.nii.gz -T2pial -autorecon3
... to correct using T2 images.
Nothing worked. This never happened to me except this time.
Any suggestions?
Thank you a lot,
Vale