Yes that would be awesome.

I am using the Martinos file drop, hope it is ok.

Thank you,

Vale

________________________________ From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Bruce Fischl fischl@nmr.mgh.harvard.edu Sent: Wednesday, June 19, 2019 4:55:53 PM To: Freesurfer support list Subject: Re: [Freesurfer] problem with reconstruction

Hi Vale

do you want to tar, gzip and ftp us that entire subject dir so we can take a look? cheers Bruce On Wed, 19 Jun 2019, Barletta, Valeria wrote:

Dear Freesurfers,

I am having issues with a reconstruction which is giving me giant defects that I cannot correct (see screenshots).

I tried to work on the wm and also to use the command

recon-all -subject NIMMS02_2year_recon -T2 T2SPACE.nii.gz -T2pial -autorecon3

... to correct using T2 images.

Nothing worked. This never happened to me except this time.

Any suggestions?

Thank you a lot,

Vale