Hi Fereshte,
Could you please clarify what you mean by "obtain the surface label"?
Thanks,
Emma
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Emma Boyd
Research Technician II
Laboratory for Computational Neuroimaging
Martinos Center for Biomedical Imaging
________________________________ From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Fereshte fereshte.ramezani@gmail.com Sent: Thursday, September 21, 2017 10:26 AM To: Freesurfer support list Subject: Re: [Freesurfer] Mris_volume
Hi Emma Are there any ways to obtain the surface label then? Thank you! On Wed, Sep 20, 2017 at 5:15 PM Boyd, Emma <EBOYD2@mgh.harvard.edumailto:EBOYD2@mgh.harvard.edu> wrote:
Hi Fereshte,
mris_volume does not create any output files, that number you see in the terminal is the total volume of a given closed surface.
Try running mris_volume -v <surface_file> instead and you will see something like this in your terminal:
reading <surface_file>... surface file read in. Volume computation took 0 minutes and 1 seconds. total volume surrounded by the surface is 381271
Emma
________________________________ From: freesurfer-bounces@nmr.mgh.harvard.edumailto:freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edumailto:freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Fereshte <fereshte.ramezani@gmail.commailto:fereshte.ramezani@gmail.com> Sent: Wednesday, September 20, 2017 1:45:17 AM To: Freesurfer support list Subject: [Freesurfer] Mris_volume
Dear FreeSurfer Developers Using "mris_volume surface_file_name " now i can't see any output files and 381271.851642 is shown in the command terminal, i have no idea what the problem is. Could you please help? Thank you!
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