Re: [Freesurfer] recon-all image output

2010/7/23 Michele Placci michele.placci@gmail.com

Dear experts, we run this command in a file of MRI 3D .nii :

recon-all -force -all -notal-check -i /my_directory_input/my_file.nii

-subjid my_directory_output

and i get the attached image of output for a single time point, after 40 hours of elaboration. We don't understand why there isn't the right side of the brain. Normal processing time is so high? What can I centre this image?

Any suggestions?

2010/7/21 Michele Placci michele.placci@gmail.com

Dear experts, we run this command in a file of MRI 3D .nii :

...

recon-all -force -all -notal-check -i /my_directory_input/my_file.nii

-subjid my_directory_output

and i get the attached image of output for a single time point, after 40 hours of elaboration. We don't understand why there isn't the right side of the brain.

Any suggestions?

Thank you all.