Thanks,
it seems to work well. is there a way to have the good labels when looking on freeview the output volume. because with the freesurferColorLut it's not the good labels. or at least having the correspondence between values and labels on a .txt file or whatever ?
Regards, Pierre
On Thu, Apr 20, 2017 at 5:04 PM, Bruce Fischl fischl@nmr.mgh.harvard.edu wrote:
Hi Pierre
use, you can try mri_aparc2aseg.
cheers Bruce On Thu, 20 Apr 2017, pierre deman-kibleur wrote:
Hi,
Is there a way to have the destrieux parcellation on a volume format ?
.nii
for example. I tried to used mri_surf2vol without success for now:
mri_surf2vol --subject 0001GRE_25-11-2014 --merge /home/b67-belledone/freesurfer/subjects/0001GRE_25-11-2014/mri/T1.mgz
--so
/home/b67-belledone/freesurfer/subjects/0001GRE_
25-11-2014/surf/lh.orig/home/b67-belledone/freesurfer/ subjects/0001GRE_25-11-2014/label/lh.aparc.a
2009s.annot --o /tmp/test.nii
Regards, Pierre
-- DEMAN Pierre Mobile : +33 7 82 57 80 94
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.