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Hi,
I am using mri_convert to change the orientation of an image in its native space from LPS to PSR. Ex. Mri_convert -out_orientation PSR input_file output_file Sometime when I do this, I lose the last coronal slice(s) of the occipital lobe when the image is converted to PSR. Is there some way to ensure that when I change the orientation, I get the whole brain back?
Thanks, Melissa