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Hi FreeSurfer community,
when I run mri_coreg I get the following error. /XYZ/2123/mri/brainmask.mgz is in the specified location.
Can you help me with this?
Thanks! Boris
mri_coreg --s 2123 --mov /XYZ/2123.nii --reg 2123.reg.lta Could not set locale No such file or directory Could not set locale
$Id: mri_coreg.c,v 1.27 2016/04/30 15:11:49 greve Exp $ cwd /home/demenzbild cmdline mri_coreg --s 2123 --mov /XYZ/2123.nii --reg 2123.reg.lta sysname Linux hostname XXX machine x86_64 user d dof 6 nsep 2 cras0 1 ftol 0.000000 linmintol 0.001000 bf 1 bflim 30.000000 bfnsamp 30 SmoothRef 0 SatPct 99.990000 MovOOB 0 optschema 1 Reading in mov /XYZ/2123.nii WARNING: 78694 NaNs found in volume /XYZ/2123.nii...
No such file or directory Reading in ref /XYZ/2123/mri/brainmask.mgz mghRead(/XYZ/2123/mri/brainmask.mgz, -1): could not open file