Hello,
I would like to work with mesh representation of pial and white surfaces in vtk format. To do that, I use the following syntax: mris_convert lh.pial lh.pial.vtk
However, there is a small issue after conversion: the vector called 'c_ras' (the RAS at the 'center' of the volume according to mri_info) is not taken into account. I can manually add this c_ras vector to correct that but I was wondering if there was any flag for mris_convert or a special command to do that ?
This kind of flag exists for mri_tesselate (with -n flag which ables to "save surface with real RAS coordinates where c_(r,a,s) != 0") so I was hoping the same kind of flags for mris_convert.
Thanks in advance for your answer !
Alexandre
Try adding --cras_correction to the command line and see if it works.
On 6/7/16 10:27 AM, Alexandre Routier wrote:
Hello,
I would like to work with mesh representation of pial and white surfaces in vtk format. To do that, I use the following syntax: mris_convert lh.pial lh.pial.vtk
However, there is a small issue after conversion: the vector called 'c_ras' (the RAS at the 'center' of the volume according to mri_info) is not taken into account. I can manually add this c_ras vector to correct that but I was wondering if there was any flag for mris_convert or a special command to do that ?
This kind of flag exists for mri_tesselate (with -n flag which ables to "save surface with real RAS coordinates where c_(r,a,s) != 0") so I was hoping the same kind of flags for mris_convert.
Thanks in advance for your answer !
Alexandre
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
I have the following error: unknown option --cras_correction. I am using FreeSurfer 5.3, I don't known if it helps.
By the way, I was wondering: why this c_ras vector is not taken into by default e.g. with mris_convert or mri_tesselate ?
2016-06-07 16:54 GMT+02:00 Douglas Greve greve@nmr.mgh.harvard.edu:
Try adding --cras_correction to the command line and see if it works.
On 6/7/16 10:27 AM, Alexandre Routier wrote:
Hello,
I would like to work with mesh representation of pial and white surfaces in vtk format. To do that, I use the following syntax: mris_convert lh.pial lh.pial.vtk
However, there is a small issue after conversion: the vector called 'c_ras' (the RAS at the 'center' of the volume according to mri_info) is not taken into account. I can manually add this c_ras vector to correct that but I was wondering if there was any flag for mris_convert or a special command to do that ?
This kind of flag exists for mri_tesselate (with -n flag which ables to "save surface with real RAS coordinates where c_(r,a,s) != 0") so I was hoping the same kind of flags for mris_convert.
Thanks in advance for your answer !
Alexandre
Freesurfer mailing listFreesurfer@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Try this version ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mris_convert
Not sure where the issue with the cras came from
On 6/7/16 4:25 PM, Alexandre Routier wrote:
I have the following error: unknown option --cras_correction. I am using FreeSurfer 5.3, I don't known if it helps.
By the way, I was wondering: why this c_ras vector is not taken into by default e.g. with mris_convert or mri_tesselate ?
2016-06-07 16:54 GMT+02:00 Douglas Greve <greve@nmr.mgh.harvard.edu mailto:greve@nmr.mgh.harvard.edu>:
Try adding --cras_correction to the command line and see if it works. On 6/7/16 10:27 AM, Alexandre Routier wrote:Hello, I would like to work with mesh representation of pial and white surfaces in vtk format. To do that, I use the following syntax: mris_convert lh.pial lh.pial.vtk However, there is a small issue after conversion: the vector called 'c_ras' (the RAS at the 'center' of the volume according to mri_info) is not taken into account. I can manually add this c_ras vector to correct that but I was wondering if there was any flag for mris_convert or a special command to do that ? This kind of flag exists for mri_tesselate (with -n flag which ables to "save surface with real RAS coordinates where c_(r,a,s) != 0") so I was hoping the same kind of flags for mris_convert. Thanks in advance for your answer ! Alexandre _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Hello all,
I'm new to surface analysis.
I have 2 groups (patient and healthy control) that i want to check differences between. I want to perform cortical thickness/ surface analysis. My categories are Patients, healthy control, age, TIV, father age, mother age. Where age & TIV are covariates of no interest. and father and mother age are covariates of interest.
I have already preprocessed the data (recon-all), but how can i proceed? Any online guide on steps for surface analysis? also making a design such as the above?
Yas
Try the group analysis tutorial http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/GroupAnalysis
On 6/8/16 2:39 AM, Dave Yas wrote:
Hello all,
I'm new to surface analysis.
I have 2 groups (patient and healthy control) that i want to check differences between. I want to perform cortical thickness/ surface analysis. My categories are Patients, healthy control, age, TIV, father age, mother age. Where age & TIV are covariates of no interest. and father and mother age are covariates of interest.
I have already preprocessed the data (recon-all), but how can i proceed? Any online guide on steps for surface analysis? also making a design such as the above?
Yas
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Thanks ! I tried on the left pial surface and I got the expected result.
2016-06-08 15:38 GMT+02:00 Douglas Greve greve@nmr.mgh.harvard.edu:
Try the group analysis tutorial http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/GroupAnalysis
On 6/8/16 2:39 AM, Dave Yas wrote:
Hello all,
I'm new to surface analysis.
I have 2 groups (patient and healthy control) that i want to check differences between. I want to perform cortical thickness/ surface analysis. My categories are Patients, healthy control, age, TIV, father age, mother age. Where age & TIV are covariates of no interest. and father and mother age are covariates of interest.
I have already preprocessed the data (recon-all), but how can i proceed? Any online guide on steps for surface analysis? also making a design such as the above?
Yas
Freesurfer mailing listFreesurfer@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Thank you very much Dough!
I need to check 4 contrasts. I made them based on the freesurfer page, but cant decide if i interpreted them right! Are my contrasts Ok?
If classes are: Patients, healthy control
and variables are: Age, TIV, father age, mother age.
Are these contrasts ok?
R# = 2* (4+1) = 10
contrast1: 0 0 0 0 0 0 -1 1 -1 1>> checking the differences between groups in terms of father and mother age regression out the effect of age and TIV
contrast2: 0 0 0 0 0 0 -1 1 0 0 0 0 0 0 0 0 0 0 1 -1 >> checking the differences between groups in terms of father or mother age regression out the effect of age and TIV
contrast3: 0 0 0 0 0 0 -1 1 0 0 >> checking the differences between groups in terms of father age regression out the effect of age and TIV and mother age
contrast4: 0 0 0 0 0 0 0 0 -1 1 >> checking the differences between groups in terms of mother age regression out the effect of age and TIV and father age
Yas
To: freesurfer@nmr.mgh.harvard.edu From: greve@nmr.mgh.harvard.edu Date: Wed, 8 Jun 2016 09:38:18 -0400 Subject: Re: [Freesurfer] Coordinate system in mris_convert
Try the group analysis tutorial
http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/GroupAnalysis
On 6/8/16 2:39 AM, Dave Yas wrote:
Hello all,
I'm new to surface analysis.
I have 2 groups (patient and healthy control) that i want to check differences between.
I want to perform cortical thickness/ surface analysis.
My categories are
Patients, healthy control, age, TIV, father age, mother age.
Where age & TIV are covariates of no interest. and father and mother age are covariates of interest.
I have already preprocessed the data (recon-all), but how can i proceed?
Any online guide on steps for surface analysis? also making a design such as the above?
Yas
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
On 06/08/2016 11:40 PM, Dave Yas wrote:
Thank you very much Dough!
I need to check 4 contrasts. I made them based on the freesurfer page, but cant decide if i interpreted them right! Are my contrasts Ok?
If classes are: Patients, healthy control
and variables are: Age, TIV, father age, mother age.
Are these contrasts ok?
R# = 2* (4+1) = 10
*contrast1:* 0 0 0 0 0 0 -1 1 -1 1>> checking the differences between groups in terms of father and mother age regression out the effect of age and TIV
That will effectively compute the difference between the mean(father age + mother age), ie, it would be like analyzing with a regressor created by adding the father age and mother age (ie, mean parent age). Is that what you want?
*contrast2:* 0 0 0 0 0 0 -1 1 0 0 0 0 0 0 0 0 0 0 1 -1 >> checking the differences between groups in terms of father or mother age regression out the effect of age and TIV
This will be significant if either the father age is diff OR the mother age is diff (or some combination thereof). It will be similar to contrast1 but not identical.
*contrast3:* 0 0 0 0 0 0 -1 1 0 0 >> checking the differences between groups in terms of father age regression out the effect of age and TIV and mother age
Yes
*contrast4: *0 0 0 0 0 0 0 0 -1 1 >> checking the differences between groups in terms of mother age regression out the effect of age and TIV and father age
Yes
Yas
To: freesurfer@nmr.mgh.harvard.edu From: greve@nmr.mgh.harvard.edu Date: Wed, 8 Jun 2016 09:38:18 -0400 Subject: Re: [Freesurfer] Coordinate system in mris_convert
Try the group analysis tutorial http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/GroupAnalysis
On 6/8/16 2:39 AM, Dave Yas wrote:
Hello all, I'm new to surface analysis. I have 2 groups (patient and healthy control) that i want to check differences between. I want to perform cortical thickness/ surface analysis. My categories are Patients, healthy control, age, TIV, father age, mother age. Where age & TIV are covariates of no interest. and father and mother age are covariates of interest. I have already preprocessed the data (recon-all), but how can i proceed? Any online guide on steps for surface analysis? also making a design such as the above? Yas _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Helllo!
That was an empty email!
To: freesurfer@nmr.mgh.harvard.edu From: greve@nmr.mgh.harvard.edu Date: Thu, 9 Jun 2016 16:33:48 -0400 Subject: Re: [Freesurfer] contrast
On 06/08/2016 11:40 PM, Dave Yas wrote:
Thank you very much Dough!
I need to check 4 contrasts. I made them based on the freesurfer page, but cant decide if i interpreted them right! Are my contrasts Ok?
If classes are: Patients, healthy control
and variables are: Age, TIV, father age, mother age.
Are these contrasts ok?
R# = 2* (4+1) = 10
*contrast1:* 0 0 0 0 0 0 -1 1 -1 1>> checking the differences between groups in terms of father and mother age regression out the effect of age and TIV
That will effectively compute the difference between the mean(father age + mother age), ie, it would be like analyzing with a regressor created by adding the father age and mother age (ie, mean parent age). Is that what you want?
*contrast2:* 0 0 0 0 0 0 -1 1 0 0 0 0 0 0 0 0 0 0 1 -1 >> checking the differences between groups in terms of father or mother age regression out the effect of age and TIV
This will be significant if either the father age is diff OR the mother age is diff (or some combination thereof). It will be similar to contrast1 but not identical.
*contrast3:* 0 0 0 0 0 0 -1 1 0 0 >> checking the differences between groups in terms of father age regression out the effect of age and TIV and mother age
Yes
*contrast4: *0 0 0 0 0 0 0 0 -1 1 >> checking the differences between groups in terms of mother age regression out the effect of age and TIV and father age
Yes
Yas
To: freesurfer@nmr.mgh.harvard.edu From: greve@nmr.mgh.harvard.edu Date: Wed, 8 Jun 2016 09:38:18 -0400 Subject: Re: [Freesurfer] Coordinate system in mris_convert
Try the group analysis tutorial http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/GroupAnalysis
On 6/8/16 2:39 AM, Dave Yas wrote:
Hello all, I'm new to surface analysis. I have 2 groups (patient and healthy control) that i want to check differences between. I want to perform cortical thickness/ surface analysis. My categories are Patients, healthy control, age, TIV, father age, mother age. Where age & TIV are covariates of no interest. and father and mother age are covariates of interest. I have already preprocessed the data (recon-all), but how can i proceed? Any online guide on steps for surface analysis? also making a design such as the above? Yas _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
I responded in the body of the email
On 6/9/16 7:57 PM, Dave Yas wrote:
/*Helllo!
That was an empty email! */
To: freesurfer@nmr.mgh.harvard.edu From: greve@nmr.mgh.harvard.edu Date: Thu, 9 Jun 2016 16:33:48 -0400 Subject: Re: [Freesurfer] contrast
On 06/08/2016 11:40 PM, Dave Yas wrote:
Thank you very much Dough!
I need to check 4 contrasts. I made them based on the freesurfer
page,
but cant decide if i interpreted them right! Are my contrasts Ok?
If classes are: Patients, healthy control
and variables are: Age, TIV, father age, mother age.
Are these contrasts ok?
R# = 2* (4+1) = 10
*contrast1:* 0 0 0 0 0 0 -1 1 -1 1>> checking the differences between groups in terms of father and mother age regression out the effect of age and TIV
That will effectively compute the difference between the mean(father age + mother age), ie, it would be like analyzing with a regressor created by adding the father age and mother age (ie, mean parent age). Is that what you want?
*contrast2:* 0 0 0 0 0 0 -1 1 0 0 0 0 0 0 0 0 0 0 1 -1 >> checking the differences between groups in terms of father or mother age regression out the effect of age and TIV
This will be significant if either the father age is diff OR the mother age is diff (or some combination thereof). It will be similar to contrast1 but not identical.
*contrast3:* 0 0 0 0 0 0 -1 1 0 0 >> checking the differences between groups in terms of father age regression out the effect of age and
TIV
and mother age
Yes
*contrast4: *0 0 0 0 0 0 0 0 -1 1 >> checking the differences between groups in terms of mother age regression out the effect of age and
TIV
and father age
Yes
Yas
To: freesurfer@nmr.mgh.harvard.edu From: greve@nmr.mgh.harvard.edu Date: Wed, 8 Jun 2016 09:38:18 -0400 Subject: Re: [Freesurfer] Coordinate system in mris_convert
Try the group analysis tutorial http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/GroupAnalysis
On 6/8/16 2:39 AM, Dave Yas wrote:
Hello all,
I'm new to surface analysis.
I have 2 groups (patient and healthy control) that i want to check differences between. I want to perform cortical thickness/ surface analysis. My categories are Patients, healthy control, age, TIV, father age, mother age. Where age & TIV are covariates of no interest. and father and mother age are covariates of interest.
I have already preprocessed the data (recon-all), but how can i proceed? Any online guide on steps for surface analysis? also making a design such as the above?
Yas
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu mailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the
e-mail.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Thank you very much again Dough, I was hoping that i understood how to make a contrast!
Thank you! To: freesurfer@nmr.mgh.harvard.edu From: greve@nmr.mgh.harvard.edu Date: Thu, 9 Jun 2016 22:10:04 -0400 Subject: Re: [Freesurfer] contrast
I responded in the body of the email
On 6/9/16 7:57 PM, Dave Yas wrote:
Helllo!
That was an empty email!
> To: freesurfer@nmr.mgh.harvard.edu
> From: greve@nmr.mgh.harvard.edu
> Date: Thu, 9 Jun 2016 16:33:48 -0400
> Subject: Re: [Freesurfer] contrast
>
>
>
> On 06/08/2016 11:40 PM, Dave Yas wrote:
> > Thank you very much Dough!
> >
> > I need to check 4 contrasts. I made them based on the freesurfer page,
> > but cant decide if i interpreted them right!
> > Are my contrasts Ok?
> >
> > If classes are:
> > Patients, healthy control
> >
> > and variables are:
> > Age, TIV, father age, mother age.
> >
> > Are these contrasts ok?
> >
> > R# = 2* (4+1) = 10
> >
> > *contrast1:* 0 0 0 0 0 0 -1 1 -1 1>> checking the differences between
> > groups in terms of father and mother age regression out the effect of
> > age and TIV
> That will effectively compute the difference between the mean(father
> age + mother age), ie, it would be like analyzing with a regressor
> created by adding the father age and mother age (ie, mean parent age).
> Is that what you want?
> >
> > *contrast2:* 0 0 0 0 0 0 -1 1 0 0
> > 0 0 0 0 0 0 0 0 1 -1 >> checking the differences
> > between groups in terms of father or mother age regression out the
> > effect of age and TIV
> This will be significant if either the father age is diff OR the mother
> age is diff (or some combination thereof). It will be similar to
> contrast1 but not identical.
> >
> > *contrast3:* 0 0 0 0 0 0 -1 1 0 0 >> checking the differences between
> > groups in terms of father age regression out the effect of age and TIV
> > and mother age
> Yes
> >
> > *contrast4: *0 0 0 0 0 0 0 0 -1 1 >> checking the differences between
> > groups in terms of mother age regression out the effect of age and TIV
> > and father age
> Yes
> >
> > Yas
> >
> >
> >
> > ------------------------------------------------------------------------
> > To: freesurfer@nmr.mgh.harvard.edu
> > From: greve@nmr.mgh.harvard.edu
> > Date: Wed, 8 Jun 2016 09:38:18 -0400
> > Subject: Re: [Freesurfer] Coordinate system in mris_convert
> >
> >
> > Try the group analysis tutorial
> > http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/GroupAnalysis
> >
> > On 6/8/16 2:39 AM, Dave Yas wrote:
> >
> > Hello all,
> >
> > I'm new to surface analysis.
> >
> > I have 2 groups (patient and healthy control) that i want to check
> > differences between.
> > I want to perform cortical thickness/ surface analysis.
> > My categories are
> > Patients, healthy control, age, TIV, father age, mother age.
> > Where age & TIV are covariates of no interest. and father and
> > mother age are covariates of interest.
> >
> > I have already preprocessed the data (recon-all), but how can i
> > proceed?
> > Any online guide on steps for surface analysis? also making a
> > design such as the above?
> >
> > Yas
> >
> >
> >
> > _______________________________________________
> > Freesurfer mailing list
> > Freesurfer@nmr.mgh.harvard.edu mailto:Freesurfer@nmr.mgh.harvard.edu
> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
> >
> >
> >
> > _______________________________________________ Freesurfer mailing
> > list Freesurfer@nmr.mgh.harvard.edu
> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The
> > information in this e-mail is intended only for the person to whom it
> > is addressed. If you believe this e-mail was sent to you in error and
> > the e-mail contains patient information, please contact the Partners
> > Compliance HelpLine at http://www.partners.org/complianceline
> > . If the e-mail was sent to you in error but does not contain patient
> > information, please contact the sender and properly dispose of the e-mail.
> >
> >
> > _______________________________________________
> > Freesurfer mailing list
> > Freesurfer@nmr.mgh.harvard.edu
> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
> --
> Douglas N. Greve, Ph.D.
> MGH-NMR Center
> greve@nmr.mgh.harvard.edu
> Phone Number: 617-724-2358
> Fax: 617-726-7422
>
> Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
> FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2
> www.nmr.mgh.harvard.edu/facility/filedrop/index.html
> Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
>
> _______________________________________________
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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freesurfer@nmr.mgh.harvard.edu
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Alexandre Routier -
Dave Yas -
Douglas Greve -
Douglas N Greve