actually, looking at your cmd line more I see that you have slashes (/) in the subject names. The argument to --subjects should just be a list of name. See the help (aparcstats2table -h) for examples. doug

On 01/18/2013 04:58 PM, Nucleos P wrote:

Hello experts:

Can someone please help me understand what I am doing wrong? This is the first time I am trying this command and it will not work...

COMMAND: aparcstats2table --subjects /RGS4_31p/rgs0868_raw /RGS4_31p/rgs0871_raw /RGS4_31p/rgs0883_raw/ /RGS4_31p/rgs1194_raw144/ /RGS4_31p/rgs1311a/ /RGS4_31p/rgs1370a/ /RGS4_31p/rgs1383a/ -t RGS4_31p/aparc.volume.rh -m volume --hemi=rh

PATH: [/usr/local/freesurfer/subjects/RGS4_31p/rgs0868_raw/stats]:pwd /usr/local/freesurfer/subjects/RGS4_31p/rgs0868_raw/stats

ERROR: SUBJECTS_DIR : /usr/local/freesurfer/subjects Parsing the .stats files ERROR: The stats file /RGS4_31p/rgs0868_raw/stats/rh.aparc.stats is not found or is too small to be a valid statsfile Use --skip flag to automatically skip bad stats files

Thank you, Catherine

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