I all!
I am a new freesurfer user. I have a problem when I perform the recon-all -all, in about 15% of MRI scans, all made with the same scanning protocol (T1 MPRAGE in a SIEMENS Avanto 1,5 T).
I can't recognize any difference between those scans which work correctly and those not. I have never found the same error on 3T MRI scans.
I've already tried to add these flags to the recon-all -all command: -use-mritotal -talairach -use-mritotal -notalairach but I've always received an error message
Thank you very much
ERROR: mpr2mni305 failed, see transforms/talairach_avi.log Darwin pro-di-villani.besta.local 13.3.0 Darwin Kernel Version 13.3.0: Tue Jun 3 21:27:35 PDT 2014; root:xnu-2422.110.17~1/RELEASE_X86_64 x86_64
Thanks very much for your attention
Francesco Milan, Italy
---------------------------------------------------------------------
FREESURFER_HOME: /Applications/freesurfer
Build stamp: freesurfer-Darwin-lion-stable-pub-v5.3.0
Kernel info: Darwin 13.3.0 x86_64
---------------------------------------------------------------------
LAST LINES IN TALAIRACH_AVI.LOG
parameters 9.0270 134.9373 110.8627 -84.3566 -7.5458 -11.3475 eta,q 0.95791 3.72402 0.0485 0.0470 0.0477 0.0513 0.0470 0.0452 0.0475 0.0471 0.0478 0.0513 0.0457 0.0435 0.0472 0.0472 0.0476 0.0428 0.0434 0.0415 0.0471 0.0471 0.0476 0.0435 0.0430 0.0415 0.0470 0.0478 0.0457 0.0525 0.0415 0.0430 0.0473 0.0511 0.0430 0.0548 0.0442 0.0453 0.0486 0.0426 0.0406 0.0672 0.0431 0.0503 niter,ni,del,rscale 7 3 12.0000 1.2000 imgrege: no voxels in register ERROR: 'imgreg_4dfp /Applications/freesurfer/average/711-2C_as_mni_average_305 /Applications/freesurfer/average/711-2B_as_mni_average_305_mask talsrcimg_g11 none talsrcimg_to_711-2C_as_mni_average_305_t4 1283' failed! status=254 ERROR: mpr2mni305 execution aborted
Try it with -notal-check doug
On 08/06/2014 04:39 PM, Francesco Deleo wrote:
I all!
I am a new freesurfer user. I have a problem when I perform the recon-all -all, in about 15% of MRI scans, all made with the same scanning protocol (T1 MPRAGE in a SIEMENS Avanto 1,5 T).
I can't recognize any difference between those scans which work correctly and those not. I have never found the same error on 3T MRI scans.
I've already tried to add these flags to the recon-all -all command: -use-mritotal -talairach -use-mritotal -notalairach but I've always received an error message
Thank you very much
ERROR: mpr2mni305 failed, see transforms/talairach_avi.log Darwin pro-di-villani.besta.local 13.3.0 Darwin Kernel Version 13.3.0: Tue Jun 3 21:27:35 PDT 2014; root:xnu-2422.110.17~1/RELEASE_X86_64 x86_64
Thanks very much for your attention
Francesco Milan, Italy
FREESURFER_HOME: /Applications/freesurfer
Build stamp: freesurfer-Darwin-lion-stable-pub-v5.3.0
Kernel info: Darwin 13.3.0 x86_64
LAST LINES IN TALAIRACH_AVI.LOG
parameters 9.0270 134.9373 110.8627 -84.3566 -7.5458 -11.3475 eta,q 0.95791 3.72402 0.0485 0.0470 0.0477 0.0513 0.0470 0.0452 0.0475 0.0471 0.0478 0.0513 0.0457 0.0435 0.0472 0.0472 0.0476 0.0428 0.0434 0.0415 0.0471 0.0471 0.0476 0.0435 0.0430 0.0415 0.0470 0.0478 0.0457 0.0525 0.0415 0.0430 0.0473 0.0511 0.0430 0.0548 0.0442 0.0453 0.0486 0.0426 0.0406 0.0672 0.0431 0.0503 niter,ni,del,rscale 7 3 12.0000 1.2000 imgrege: no voxels in register ERROR: 'imgreg_4dfp /Applications/freesurfer/average/711-2C_as_mni_average_305 /Applications/freesurfer/average/711-2B_as_mni_average_305_mask talsrcimg_g11 none talsrcimg_to_711-2C_as_mni_average_305_t4 1283' failed! status=254 ERROR: mpr2mni305 execution aborted
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Thank you Doug! but i tried it in many cases but I've always received the same error message... Is there something else I can try?
Francesco
2014-08-07 0:46 GMT+02:00 Douglas N Greve greve@nmr.mgh.harvard.edu:
Try it with -notal-check doug
On 08/06/2014 04:39 PM, Francesco Deleo wrote:
I all!
I am a new freesurfer user. I have a problem when I perform the recon-all -all, in about 15% of MRI scans, all made with the same scanning protocol (T1 MPRAGE in a SIEMENS Avanto 1,5 T).
I can't recognize any difference between those scans which work correctly and those not. I have never found the same error on 3T MRI scans.
I've already tried to add these flags to the recon-all -all command: -use-mritotal -talairach -use-mritotal -notalairach but I've always received an error message
Thank you very much
ERROR: mpr2mni305 failed, see transforms/talairach_avi.log Darwin pro-di-villani.besta.local 13.3.0 Darwin Kernel Version 13.3.0: Tue Jun 3 21:27:35 PDT 2014; root:xnu-2422.110.17~1/RELEASE_X86_64
x86_64
Thanks very much for your attention
Francesco Milan, Italy
FREESURFER_HOME: /Applications/freesurfer
Build stamp: freesurfer-Darwin-lion-stable-pub-v5.3.0
Kernel info: Darwin 13.3.0 x86_64
LAST LINES IN TALAIRACH_AVI.LOG
parameters 9.0270 134.9373 110.8627 -84.3566 -7.5458 -11.3475 eta,q 0.95791 3.72402 0.0485 0.0470 0.0477 0.0513 0.0470 0.0452 0.0475 0.0471 0.0478 0.0513 0.0457 0.0435 0.0472 0.0472 0.0476 0.0428 0.0434 0.0415 0.0471 0.0471 0.0476 0.0435 0.0430 0.0415 0.0470 0.0478 0.0457 0.0525 0.0415 0.0430 0.0473 0.0511 0.0430 0.0548 0.0442 0.0453 0.0486 0.0426 0.0406 0.0672 0.0431 0.0503 niter,ni,del,rscale 7 3 12.0000 1.2000 imgrege: no voxels in register ERROR: 'imgreg_4dfp /Applications/freesurfer/average/711-2C_as_mni_average_305 /Applications/freesurfer/average/711-2B_as_mni_average_305_mask talsrcimg_g11 none talsrcimg_to_711-2C_as_mni_average_305_t4 1283' failed! status=254 ERROR: mpr2mni305 execution aborted
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Hi Franesco
can you post an image of the scan you are trying to run through recon-all? And give us some idea of what it is (resolution, etc...)? Something is badly wrong if they are all failing. You can also upload the orig.mgz of one of them and we will take a look if you want.
cheers Bruce
On Thu, 7 Aug 2014, Francesco Deleo wrote:
Thank you Doug!but i tried it in many cases but I've always received the same error message... Is there something else I can try?
Francesco
2014-08-07 0:46 GMT+02:00 Douglas N Greve greve@nmr.mgh.harvard.edu: Try it with -notal-check doug
On 08/06/2014 04:39 PM, Francesco Deleo wrote: > I all! > > I am a new freesurfer user. > I have a problem when I perform the recon-all -all, in about 15% of > MRI scans, all made with the same scanning protocol (T1 MPRAGE in a > SIEMENS Avanto 1,5 T). > > I can't recognize any difference between those scans which work > correctly and those not. > I have never found the same error on 3T MRI scans. > > I've already tried to add these flags to the recon-all -all command: > -use-mritotal > -talairach -use-mritotal > -notalairach > but I've always received an error message > > Thank you very much > > ERROR: mpr2mni305 failed, see transforms/talairach_avi.log > Darwin pro-di-villani.besta.local 13.3.0 Darwin Kernel Version 13.3.0: > Tue Jun 3 21:27:35 PDT 2014; root:xnu-2422.110.17~1/RELEASE_X86_64 x86_64 > > Thanks very much for your attention > > Francesco > Milan, Italy > > --------------------------------------------------------------------- > > FREESURFER_HOME: /Applications/freesurfer > > Build stamp: freesurfer-Darwin-lion-stable-pub-v5.3.0 > > Kernel info: Darwin 13.3.0 x86_64 > > --------------------------------------------------------------------- > > > LAST LINES IN TALAIRACH_AVI.LOG > > parameters > 9.0270 134.9373 110.8627 -84.3566 -7.5458 -11.3475 > eta,q 0.95791 3.72402 > 0.0485 0.0470 0.0477 0.0513 0.0470 0.0452 > 0.0475 0.0471 0.0478 0.0513 0.0457 0.0435 > 0.0472 0.0472 0.0476 0.0428 0.0434 0.0415 > 0.0471 0.0471 0.0476 0.0435 0.0430 0.0415 > 0.0470 0.0478 0.0457 0.0525 0.0415 0.0430 > 0.0473 0.0511 0.0430 0.0548 0.0442 0.0453 > 0.0486 0.0426 0.0406 0.0672 0.0431 0.0503 > niter,ni,del,rscale 7 3 12.0000 1.2000 > imgrege: no voxels in register > ERROR: 'imgreg_4dfp > /Applications/freesurfer/average/711-2C_as_mni_average_305 > /Applications/freesurfer/average/711-2B_as_mni_average_305_mask > talsrcimg_g11 none talsrcimg_to_711-2C_as_mni_average_305_t4 1283' > failed! status=254 > ERROR: mpr2mni305 execution aborted > >
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Have you looked in transforms/talairach_avi.log?
On 08/07/2014 07:57 AM, Francesco Deleo wrote:
Thank you Doug! but i tried it in many cases but I've always received the same error message... Is there something else I can try?
Francesco
2014-08-07 0:46 GMT+02:00 Douglas N Greve <greve@nmr.mgh.harvard.edu mailto:greve@nmr.mgh.harvard.edu>:
Try it with -notal-check doug On 08/06/2014 04:39 PM, Francesco Deleo wrote: > I all! > > I am a new freesurfer user. > I have a problem when I perform the recon-all -all, in about 15% of > MRI scans, all made with the same scanning protocol (T1 MPRAGE in a > SIEMENS Avanto 1,5 T). > > I can't recognize any difference between those scans which work > correctly and those not. > I have never found the same error on 3T MRI scans. > > I've already tried to add these flags to the recon-all -all command: > -use-mritotal > -talairach -use-mritotal > -notalairach > but I've always received an error message > > Thank you very much > > ERROR: mpr2mni305 failed, see transforms/talairach_avi.log > Darwin pro-di-villani.besta.local 13.3.0 Darwin Kernel Version 13.3.0: > Tue Jun 3 21:27:35 PDT 2014; root:xnu-2422.110.17~1/RELEASE_X86_64 x86_64 > > Thanks very much for your attention > > Francesco > Milan, Italy > > --------------------------------------------------------------------- > > FREESURFER_HOME: /Applications/freesurfer > > Build stamp: freesurfer-Darwin-lion-stable-pub-v5.3.0 > > Kernel info: Darwin 13.3.0 x86_64 > > --------------------------------------------------------------------- > > > LAST LINES IN TALAIRACH_AVI.LOG > > parameters > 9.0270 134.9373 110.8627 -84.3566 -7.5458 -11.3475 > eta,q 0.95791 3.72402 > 0.0485 0.0470 0.0477 0.0513 0.0470 0.0452 > 0.0475 0.0471 0.0478 0.0513 0.0457 0.0435 > 0.0472 0.0472 0.0476 0.0428 0.0434 0.0415 > 0.0471 0.0471 0.0476 0.0435 0.0430 0.0415 > 0.0470 0.0478 0.0457 0.0525 0.0415 0.0430 > 0.0473 0.0511 0.0430 0.0548 0.0442 0.0453 > 0.0486 0.0426 0.0406 0.0672 0.0431 0.0503 > niter,ni,del,rscale 7 3 12.0000 1.2000 > imgrege: no voxels in register > ERROR: 'imgreg_4dfp > /Applications/freesurfer/average/711-2C_as_mni_average_305 > /Applications/freesurfer/average/711-2B_as_mni_average_305_mask > talsrcimg_g11 none talsrcimg_to_711-2C_as_mni_average_305_t4 1283' > failed! status=254 > ERROR: mpr2mni305 execution aborted > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu <mailto:greve@nmr.mgh.harvard.edu> Phone Number: 617-724-2358 <tel:617-724-2358> Fax: 617-726-7422 <tel:617-726-7422> Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Thank you all for attention and help! Maybe we're finding the problem: in cases I received the mpr2mni305 error the orig.mgz is unintelligible (it is white with some black point). But my dicoms are ok (I've checked!). I've already tried converting dicom to tiff but I got the same error message and the same unintelligible orig.mgz (and the tiff are ok too!). So I think the likely problem is in the recon-all -i command! Any idea?
It remains a mistery for me why I have this problem only in some (and not in every one) MRI scans even if all the parameters are the same.
thanks again
Francesco
2014-08-07 17:16 GMT+02:00 Douglas N Greve greve@nmr.mgh.harvard.edu:
Have you looked in transforms/talairach_avi.log?
On 08/07/2014 07:57 AM, Francesco Deleo wrote:
Thank you Doug! but i tried it in many cases but I've always received the same error message... Is there something else I can try?
Francesco
2014-08-07 0:46 GMT+02:00 Douglas N Greve <greve@nmr.mgh.harvard.edu mailto:greve@nmr.mgh.harvard.edu>:
Try it with -notal-check doug On 08/06/2014 04:39 PM, Francesco Deleo wrote: > I all! > > I am a new freesurfer user. > I have a problem when I perform the recon-all -all, in about 15% of > MRI scans, all made with the same scanning protocol (T1 MPRAGE in a > SIEMENS Avanto 1,5 T). > > I can't recognize any difference between those scans which work > correctly and those not. > I have never found the same error on 3T MRI scans. > > I've already tried to add these flags to the recon-all -allcommand:
> -use-mritotal > -talairach -use-mritotal > -notalairach > but I've always received an error message > > Thank you very much > > ERROR: mpr2mni305 failed, see transforms/talairach_avi.log > Darwin pro-di-villani.besta.local 13.3.0 Darwin Kernel Version 13.3.0: > Tue Jun 3 21:27:35 PDT 2014; root:xnu-2422.110.17~1/RELEASE_X86_64 x86_64 > > Thanks very much for your attention > > Francesco > Milan, Italy > > --------------------------------------------------------------------- > > FREESURFER_HOME: /Applications/freesurfer > > Build stamp: freesurfer-Darwin-lion-stable-pub-v5.3.0 > > Kernel info: Darwin 13.3.0 x86_64 > > --------------------------------------------------------------------- > > > LAST LINES IN TALAIRACH_AVI.LOG > > parameters > 9.0270 134.9373 110.8627 -84.3566 -7.5458 -11.3475 > eta,q 0.95791 3.72402 > 0.0485 0.0470 0.0477 0.0513 0.0470 0.0452 > 0.0475 0.0471 0.0478 0.0513 0.0457 0.0435 > 0.0472 0.0472 0.0476 0.0428 0.0434 0.0415 > 0.0471 0.0471 0.0476 0.0435 0.0430 0.0415 > 0.0470 0.0478 0.0457 0.0525 0.0415 0.0430 > 0.0473 0.0511 0.0430 0.0548 0.0442 0.0453 > 0.0486 0.0426 0.0406 0.0672 0.0431 0.0503 > niter,ni,del,rscale 7 3 12.0000 1.2000 > imgrege: no voxels in register > ERROR: 'imgreg_4dfp > /Applications/freesurfer/average/711-2C_as_mni_average_305 > /Applications/freesurfer/average/711-2B_as_mni_average_305_mask > talsrcimg_g11 none talsrcimg_to_711-2C_as_mni_average_305_t4 1283' > failed! status=254 > ERROR: mpr2mni305 execution aborted > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu <mailto:greve@nmr.mgh.harvard.edu> Phone Number: 617-724-2358 <tel:617-724-2358> Fax: 617-726-7422 <tel:617-726-7422> Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
what does the rawavg.mgz look like? If it is ok, can you email it to us? On Fri, 8 Aug 2014, Francesco Deleo wrote:
Thank you all for attention and help! Maybe we're finding the problem: in cases I received the mpr2mni305 error the orig.mgz is unintelligible (it is white with some black point). But my dicoms are ok (I've checked!). I've already tried converting dicom to tiff but I got the same error message and the same unintelligible orig.mgz (and the tiff are ok too!). So I think the likely problem is in the recon-all -i command! Any idea?
It remains a mistery for me why I have this problem only in some (and not in every one) MRI scans even if all the parameters are the same.
thanks again
Francesco
2014-08-07 17:16 GMT+02:00 Douglas N Greve greve@nmr.mgh.harvard.edu: Have you looked in transforms/talairach_avi.log?
On 08/07/2014 07:57 AM, Francesco Deleo wrote: > Thank you Doug! > but i tried it in many cases but I've always received the same error > message... > Is there something else I can try? > > Francesco > > > 2014-08-07 0:46 GMT+02:00 Douglas N Greve <greve@nmr.mgh.harvard.edumailto:greve@nmr.mgh.harvard.edu>:
Try it with -notal-check doug
On 08/06/2014 04:39 PM, Francesco Deleo wrote: > I all! > > I am a new freesurfer user. > I have a problem when I perform the recon-all -all, in about
15% of
> MRI scans, all made with the same scanning protocol (T1 MPRAGE
in a
> SIEMENS Avanto 1,5 T). > > I can't recognize any difference between those scans which
work
> correctly and those not. > I have never found the same error on 3T MRI scans. > > I've already tried to add these flags to the recon-all -all
command:
> -use-mritotal > -talairach -use-mritotal > -notalairach > but I've always received an error message > > Thank you very much > > ERROR: mpr2mni305 failed, see transforms/talairach_avi.log > Darwin pro-di-villani.besta.local 13.3.0 Darwin Kernel Version 13.3.0: > Tue Jun 3 21:27:35 PDT 2014; root:xnu-2422.110.17~1/RELEASE_X86_64 x86_64 > > Thanks very much for your attention > > Francesco > Milan, Italy > >
> > FREESURFER_HOME: /Applications/freesurfer > > Build stamp: freesurfer-Darwin-lion-stable-pub-v5.3.0 > > Kernel info: Darwin 13.3.0 x86_64 > >
> > > LAST LINES IN TALAIRACH_AVI.LOG > > parameters > 9.0270 134.9373 110.8627 -84.3566 -7.5458 -11.3475 > eta,q 0.95791 3.72402 > 0.0485 0.0470 0.0477 0.0513 0.0470 0.0452 > 0.0475 0.0471 0.0478 0.0513 0.0457 0.0435 > 0.0472 0.0472 0.0476 0.0428 0.0434 0.0415 > 0.0471 0.0471 0.0476 0.0435 0.0430 0.0415 > 0.0470 0.0478 0.0457 0.0525 0.0415 0.0430 > 0.0473 0.0511 0.0430 0.0548 0.0442 0.0453 > 0.0486 0.0426 0.0406 0.0672 0.0431 0.0503 > niter,ni,del,rscale 7 3 12.0000 1.2000 > imgrege: no voxels in register > ERROR: 'imgreg_4dfp > /Applications/freesurfer/average/711-2C_as_mni_average_305 >
/Applications/freesurfer/average/711-2B_as_mni_average_305_mask
> talsrcimg_g11 none talsrcimg_to_711-2C_as_mni_average_305_t4
1283'
> failed! status=254 > ERROR: mpr2mni305 execution aborted > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu mailto:Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu mailto:greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 tel:617-724-2358 Fax: 617-726-7422 tel:617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu
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Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu
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Bruce Fischl -
Douglas N Greve -
Francesco Deleo