16 Nov
2021
16 Nov
'21
4:26 p.m.
Dear Freesurfer group,
I was running recon-all (Freesurfer 7.2 on Ubuntu) and received the following error:
"
mris_fix_topology -mgz -sphere qsphere.nofix -inflated inflated.nofix -orig orig.nofix -out orig.premesh -ga -seed 1234 UC07 rh
Waiting for PID 6337 of (6337 6340) to complete...
Waiting for PID 6340 of (6337 6340) to complete...
/home/basuia/Documents/mmvt_root/freesurfer/bin/reconbatchjobs: line 77: 6340 Segmentation fault (core dumped) exec $JOB >> $LOG 2>&1
PIDs (6337 6340) completed and logs appended.
"
Please find the log file attached.
Any idea what is the problem?
Thanks,
Noam